26 #ifndef PHYSICALMODEL_H
27 #define PHYSICALMODEL_H
33 class ExclusiveComponent;
34 class InformativeComponent;
55 #if defined(_WIN32) && !defined(__MINGW32__)
56 #pragma warning( disable : 4290 )
116 const std::string
getName()
const;
118 void setName(
const std::string);
145 void xmlPrint(std::ostream& o,
bool opt =
false);
261 virtual void setProgress(
const float donePercentage);
286 void xmlRead(
const char* n);
289 bool parseTree(std::unique_ptr<physicalModel::PhysicalModel> root, std::string defaultName);
291 bool parseAtoms(physicalModel::Atoms atomsRoot);
293 bool parseComponents(physicalModel::MultiComponent mcFather,
Component* father,
bool isExclusive);
327 std::vector <Cell*> optimizedCellList;
330 bool cellIndexOptimized;
334 void optimizeIndexes();
367 return isModifiedFlag;
371 isModifiedFlag =
true;
375 return exclusiveComponents;
378 return informativeComponents;
391 if (quickAccessed && quickAccessed->
getIndex() == id) {
392 return quickAccessed;
397 mapIt = atomMap.find(
id);
400 return ((mapIt == atomMap.end()) ? nullptr : (
Atom*) mapIt->second);
406 if (cellIndexOptimized) {
407 return optimizedCellList[cellIndex];
413 mapIt = cellMap.find(cellIndex);
416 return ((mapIt == cellMap.end()) ?
nullptr : (
Cell*) mapIt->second);
425 auto mapIt = cellMap.begin();
427 while (mapIt != cellMap.end() && mapIt->second->getName() != n) {
432 if (mapIt != cellMap.end()) {
433 return mapIt->second;
437 mapIt = atomMap.begin();
439 while (mapIt != atomMap.end() && mapIt->second->getName() != n) {
444 if (mapIt != atomMap.end()) {
445 return mapIt->second;
std::map< unsigned int, Structure * > ::iterator GlobalIndexStructureMapIterator
the iterator corresponding to GlobalIndexStructureMap
Definition: PhysicalModel.h:73
std::pair< unsigned int, Structure * > GlobalIndexStructurePair
definition of a couple (=STL pair) (int , Structure *) this associates a global cell/atom index to th...
Definition: PhysicalModel.h:66
void(*)(const float donePercentage) PtrToSetProgressFunction
Definition of a function/method that could be called by the setProgress method.
Definition: PhysicalModel.h:60
std::map< unsigned int, Structure * > GlobalIndexStructureMap
definition of the association set (=map in STL) globalIndexStructureMap.
Definition: PhysicalModel.h:71
An atom has an unique index in the physical model object, a 3D position, and different basic properti...
Definition: Atom.h:49
A cell has an unique index in the physical model object, is composed by atoms, and different basic pr...
Definition: Cell.h:46
A component is something that composed something and could also be a part of something.
Definition: modeling/libraries/pml/Component.h:48
A multi-component stores other components, hence providing a way to have an tree representation of co...
Definition: MultiComponent.h:44
This is the main class of this project.
Definition: PhysicalModel.h:86
void setModified()
tell the physical model something has changed (for example: a property was modified/added).
Definition: PhysicalModel.h:370
virtual ~PhysicalModel()
destructor
Definition: PhysicalModel.cpp:67
unsigned int getNumberOfAtoms() const
get the number of atoms
Definition: PhysicalModel.cpp:716
Properties * getProperties()
get all properties (beware of what you do with them!): please consider calling setModified().
Definition: PhysicalModel.h:354
bool isModified()
check if something have changed
Definition: PhysicalModel.h:366
void exportPatran(std::string filename)
Save the geometry (atoms/cells) of this PhysicalModel in the Patran format.
Definition: PhysicalModel.cpp:896
double * getPositionPointer() const
get the pointer to the memory space allocated for the atom's position.
Definition: PhysicalModel.cpp:145
Cell * getCell(const unsigned int id)
get the cell that has the global index given in parameters.
Definition: PhysicalModel.h:405
unsigned int getNumberOfCells() const
get the total nr of cell in the physical model (exclusive as well as informative)
Definition: PhysicalModel.cpp:130
Component * getInformativeComponent(const unsigned int) const
get an informative component by its index in the list
Definition: PhysicalModel.cpp:736
PhysicalModel() noexcept
Default constructor : this one just initialize everything.
Definition: PhysicalModel.cpp:54
Structure * getStructureByName(const std::string n)
get a cell using its name
Definition: PhysicalModel.h:421
void setName(const std::string)
set the name of the physical model
Definition: PhysicalModel.h:362
bool addGlobalIndexAtomPair(std::GlobalIndexStructurePair)
add or update a pair to the atom map.
Definition: PhysicalModel.cpp:605
Atom * getAtom(const unsigned int id)
Get the atom that has the global index given in parameters.
Definition: PhysicalModel.h:385
virtual void setProgress(const float donePercentage)
this method is called during a long process everytime a little bit of the process is finished.
Definition: PhysicalModel.cpp:84
virtual void setAtomPosition(Atom *atom, const double pos[3])
Set the new position of an atom.
Definition: PhysicalModel.cpp:671
MultiComponent * getExclusiveComponents() const
get all the exclusive components
Definition: PhysicalModel.h:374
unsigned int getNumberOfInformativeComponents() const
get the total number of informative components
Definition: PhysicalModel.cpp:706
bool addAtom(Atom *)
Add a new atom to the atoms' structural component.
Definition: PhysicalModel.cpp:592
Component * getComponentByName(const std::string n)
get a structural or multi component by its name.
Definition: PhysicalModel.cpp:553
void xmlPrint(std::ostream &o, bool opt=false)
print the physical model to an output stream in a XML format (see physicalmodel.xsd for detail about ...
Definition: PhysicalModel.cpp:258
const std::string getName() const
Return the name of the physical model.
Definition: PhysicalModel.h:358
unsigned int getNumberOfExclusiveComponents() const
get the total number of exclusive components
Definition: PhysicalModel.cpp:696
Component * getExclusiveComponent(const unsigned int) const
get an exclusive component by its index in the list
Definition: PhysicalModel.cpp:726
void setExclusiveComponents(MultiComponent *)
set the exclusive multi component. Becareful: the physical model takes control of this MultiComponent
Definition: PhysicalModel.cpp:676
StructuralComponent * getAtoms() const
get all the atoms
Definition: PhysicalModel.h:380
bool addGlobalIndexCellPair(std::GlobalIndexStructurePair)
add or update a pair to the cell map.
Definition: PhysicalModel.cpp:633
void setAtoms(StructuralComponent *, bool deleteOld=true)
set the atom structural component.
Definition: PhysicalModel.cpp:572
void setInformativeComponents(MultiComponent *)
set the exclusive multi component. Becareful: the physical model takes control of this MultiComponent
Definition: PhysicalModel.cpp:686
static const char * VERSION
Current PML library version.
Definition: PhysicalModel.h:109
MultiComponent * getInformativeComponents() const
get all the informative components
Definition: PhysicalModel.h:377
void exportAnsysMesh(std::string filename)
Save the mesh (atoms/cells) of this PhysicalModel in the Ansys format.
Definition: PhysicalModel.cpp:747
Describes the properties common to all structures and components.
Definition: Properties.h:59
std::string getName() const
get the name (be careful, this method DOES NOT return a copy, so you got the direct ptr to the name!...
Definition: Properties.h:250
void setName(std::string)
set the name (use the string = operator)
Definition: Properties.h:254
A structural component is composed either by cell or by atoms.
Definition: StructuralComponent.h:52
Structure * getStructure(const unsigned int) const
get a structure by its index (fisrt structure is at index 0)
Definition: StructuralComponent.h:220
Pure virtual class that represent an element of the structure.
Definition: Structure.h:43
unsigned int getIndex() const
get the structure unique index (stored in its property)
Definition: Structure.cpp:30