Computer Assited Medical Intervention Tool Kit  version 4.1
Public Member Functions | Private Member Functions | Private Attributes | List of all members
DicomComponent Class Reference

DICOM Component represents a volumic image of a DICOM SERIES with its corresponding tags information (as CamiTK properties). More...

#include <DicomComponent.h>

Inherits camitk::ImageComponent.

Public Member Functions

 DicomComponent (DicomSerie *dSerie)
 Create a new Component that handles DICOM images This method may throw an AbortException if a problem occurs. More...
 
DicomSeriegetSerie ()
 Get the DicomSerie associated to this component. More...
 
virtual ~DicomComponent ()
 Default Destructor. More...
 
- Public Member Functions inherited from camitk::ImageComponent
double getActualMaxColor () const
 Max gray level found in the image given its data type. More...
 
double getActualMinColor () const
 Min gray level found in the image given its data type. More...
 
int getActualNumberOfColors () const
 Actual Number of colors: difference betweent the maximun and the minimum gray levels found in the image. More...
 
SingleImageComponentgetArbitrarySlices ()
 Returns the arbitrary slice. More...
 
SingleImageComponentgetAxialSlices ()
 Returns the axial slice. More...
 
SingleImageComponentgetCoronalSlices ()
 Returns the coronal slice. More...
 
vtkSmartPointer< vtkImageData > getImageData () const
 get the image volume managed by this Component More...
 
vtkSmartPointer< vtkImageData > getImageDataWithFrameTransform ()
 Compute a copy of the original image data on which the frame transform has been applied. More...
 
QString getImageName () const
 getter/setter for the property More...
 
ImageOrientationHelper::PossibleImageOrientations getInitialOrientation () const
 Get the initial image orientation. More...
 
void getLastPixelPicked (int *x, int *y, int *z)
 Get the last pixel picked using CTRL + LEFT/RIGHT CLICK in voxel index (i, j, k) indicates the voxel index (no notion of voxel size) More...
 
void getLastPointPickedImageCoords (double *x, double *y, double *z)
 Get the last point picked using CTRL + LEFT/RIGHT CLICK in image real coordinates (this takes into account voxel size) More...
 
void getLastPointPickedWorldCoords (double *x, double *y, double *z)
 Get Get the last point picked using CTRL + LEFT/RIGHT CLICK in world coordinates This takes into account voxel size and image origin (and possible image rigid transforms). More...
 
virtual vtkSmartPointer< vtkWindowLevelLookupTable > getLut ()
 get the current lookup table More...
 
double getMaxColor () const
 Max possible gray level of the image given its data type. More...
 
double getMinColor () const
 Min possible gray level of the image given its data type. More...
 
int getNumberOfColors () const override
 Number of colors: number of possible gray levels in the image computed from the min and the max of the data type ; e.g. More...
 
int getNumberOfSlices () const override
 Number of axial slices (i.e. More...
 
const vtkSmartPointer< vtkMatrix4x4 > getRotationMatrix ()
 
SingleImageComponentgetSagittalSlices ()
 Returns the sagittal slice. More...
 
MeshComponentgetVolumeRenderingChild ()
 Returns the MeshComponent which will contain the volume rendering actor. More...
 
 ImageComponent (const QString &file)
 constructor This method may throw an AbortException if a problem occurs. More...
 
 ImageComponent (vtkSmartPointer< vtkImageData > anImageData, const QString &name, bool copy=false, ImageOrientationHelper::PossibleImageOrientations initialOrientation=ImageOrientationHelper::RAI)
 Creates an ImageComponent from a vtkImageData This method may throw an AbortException if a problem occurs. More...
 
void pixelPicked (double x, double y, double z, SingleImageComponent *whoIsAsking)
 Method called when a pixel has been picked in the 3D view. More...
 
void refresh () const override
 force refresh of all interactive viewers that are displayng sub-components as ImageComponent is not itself displayed by any viewer More...
 
virtual void replaceImageData (vtkSmartPointer< vtkImageData > anImageData, bool copy=false, ImageOrientationHelper::PossibleImageOrientations initialOrientation=ImageOrientationHelper::RAI)
 Replaces the current image volume by the one given in parameters. More...
 
void setImageName (const QString &)
 
virtual void setLut (vtkSmartPointer< vtkWindowLevelLookupTable > lookupTable)
 Update the lookup table of the image viewer (see InterfaceBitMap). More...
 
void setSelected (const bool b, const bool recursive=false) override
 set selected will select all the Image components (axial, sagittal and coronal). More...
 
 ~ImageComponent () override
 Destructor. More...
 
void updateProperty (QString, QVariant) override
 
unsigned int getNumberOfPropertyWidget () override
 return number of tabs in property explorer: there is more than one widget More...
 
QWidget * getPropertyWidgetAt (unsigned int i) override
 get the property widget (to view as tabs in the property explorer): the default property widget and the selection view More...
 
- Public Member Functions inherited from camitk::Component
 Component (QString file, QString name, Representation rep=NO_REPRESENTATION)
 Component constructor for top-level component (please use the other constructor for sub-level components). More...
 
 Component (Component *parentComponent, const QString &name, Representation rep=NO_REPRESENTATION)
 Component constructor for a Component that is a child of another Component You should not use this constructor for a top-level component. More...
 
 ~Component () override
 default destructor. More...
 
Representation getRepresentation () const
 return the type of representation concretely implemented by this Component in the InteractiveViewer. More...
 
bool isTopLevel () const
 return true if this component is a top-level component More...
 
virtual ComponentgetParentComponent ()
 get the parent component More...
 
virtual ComponentgetTopLevelComponent ()
 get the top-level component More...
 
virtual InterfaceFramegetFrame ()
 get the associated frame More...
 
virtual void setModified (bool modified=true)
 set the modified flag More...
 
virtual bool getModified () const
 set the modified flag More...
 
virtual void setVisibility (Viewer *, bool)
 set the visibility for a viewer More...
 
virtual bool getVisibility (Viewer *) const
 get the visibility of a viewer More...
 
virtual void refreshInterfaceNode ()
 Asks all viewers that are currently displaying this Component to rebuild the representation of the InterfaceNode for this Component. More...
 
virtual bool isSelected () const
 Check if this data component is selected. More...
 
const QString getFileName () const
 get the file name where the data have to be stored/were stored More...
 
void setFileName (const QString &)
 set the file name where the data have to be stored More...
 
bool event (QEvent *e) override
 Overriden from QObject, this one is only intercepting signal for dynamic property changed (see constructor). More...
 
QMenu * getActionMenu ()
 Get a QMenu that contains all the action that can be applied to this component. More...
 
QStringList getHierarchy () const override
 
bool isInstanceOf (QString className) const override
 Assert that a Component instance really inherits from a given className. More...
 
QObject * getPropertyObject ()
 Get the property object that could be understood by PropertyEditor. More...
 
void setIndexOfPropertyExplorerTab (unsigned int index)
 Set the index of the tab in the ProperlyExplorer to select for display. More...
 
unsigned int getIndexOfPropertyExplorerTab ()
 Get the index of the tab in the ProperlyExplorer to select for display. More...
 
Q_INVOKABLE PropertygetProperty (QString name) override
 Get a Property given its name. More...
 
bool addProperty (Property *) override
 Add a new CamiTK property to the component. More...
 
void addChild (InterfaceNode *) override
 add a child Component (sub item in the hierarchy), and modify the child's parent to be equal to this instance More...
 
void attachChild (InterfaceNode *) override
 add a child Component (but leave its parent unchanged) More...
 
void removeChild (InterfaceNode *) override
 remove from the the sub item vector. More...
 
void setParent (InterfaceNode *) override
 set the parent Component. This method automatically remove this Component from its previous (if already had one parent Component) More...
 
void deleteChildren () override
 delete all sub Component, but do not delete the pointer (only the top-level component has the right to do that) More...
 
QString getName () const override
 get the name to be displayed More...
 
void setName (const QString &) override
 set the name to be displayed More...
 
const ComponentListgetChildren () override
 get the list of the InterfaceNode children (sub items in the hierarchy) More...
 
bool doubleClicked () override
 this method is called each time the InterfaceNode is double clicked by the user. More...
 
InterfaceNodegetParent () override
 get the parent Component More...
 
QPixmap getIcon () override
 Get the pixmap that will be displayed for this node. More...
 
bool inItalic () const override
 A component name is not displayed in italic by default. More...
 
QMenu * getPopupMenu (QWidget *parent=nullptr)
 get the popup menu to display (always return NULL, overwrite this method if you want to give here you own popup) More...
 
const QString getLabel () const override
 
void setLabel (QString newName) override
 set the string used to display the label, do the same as setName More...
 
 delegateGet0 (myGeometry, getPointSet, vtkSmartPointer< vtkPointSet >) delegate1(myGeometry
 
vtkSmartPointer< vtkPointSet > delegate1 (myGeometry, setPointData, vtkSmartPointer< vtkDataArray >) delegateConstGet0(myGeometry
 
vtkSmartPointer< vtkPointSet > vtkSmartPointer< vtkAlgorithmOutput > delegate1 (myGeometry, setDataConnection, vtkSmartPointer< vtkAlgorithmOutput >) delegateGet1(myGeometry
 
vtkSmartPointer< vtkPointSet > vtkSmartPointer< vtkAlgorithmOutput > const RenderingModes vtkSmartPointer< vtkProp > getProp (const QString &param)
 Return the vtkProp (actors, volumes and annotations) corresponding to the given name. More...
 
unsigned int getNumberOfProp () const
 return the number of additional prop More...
 
vtkSmartPointer< vtkProp > getProp (unsigned int index)
 return an additional prop by its index More...
 
bool addProp (const QString &name, vtkSmartPointer< vtkProp > prop)
 insert an additional prop, defining it by its name (default visibility = false) More...
 
bool removeProp (const QString &name)
 remove a given additional prop. More...
 
void pointPicked (vtkIdType, bool)
 an inherited class can redefine this method something specific. More...
 
void cellPicked (vtkIdType, bool)
 an inherited class can redefine this method something specific. More...
 
void getBounds (double *bounds) override
 compute the object's bounding box [xmin,xmax, ymin,ymax, zmin,zmax], see Component.cpp More...
 
double getBoundingRadius () override
 compute the object's bounding sphere radius, More...
 
 delegate4 (myGeometry, setPointPosition, const unsigned int, const double, const double, const double) delegateAndInvokeChildren1(myGeometry
 
const RenderingModes const InterfaceGeometry::RenderingModes getRenderingModes () const override
 see Component.cpp More...
 
 delegateAndInvokeChildren1 (myGeometry, setEnhancedModes, const EnhancedModes) delegateConstGet0(myGeometry
 
const EnhancedModes delegateAndInvokeChildren1Array (myGeometry, setActorColor, const RenderingModes, double, 4) delegateAndInvokeChildren4(myGeometry
 
const EnhancedModes const const const const double void getActorColor (const RenderingModes, double [4]) override
 see Component.cpp More...
 
 delegateAndInvokeChildren3 (myGeometry, setColor, const double, const double, const double) delegateAndInvokeChildren4(myGeometry
 
const const const const double delegateAndInvokeChildren2 (myGeometry, setActorOpacity, const RenderingModes, const double) delegateConstGet1(myGeometry
 
const const const const double const RenderingModes delegateAndInvokeChildren1 (myGeometry, setOpacity, const double) delegate2(myGeometry
 
const const const const double const RenderingModes double delegate1 (myGeometry, setTexture, vtkSmartPointer< vtkTexture >) void setGlyphType(const GlyphTypes type
 
 delegate1 (myGeometry, setLinesAsTubes, bool) delegate1(myGeometry
 
 delegateConstGet0 (mySlice, getImageData, vtkSmartPointer< vtkImageData >) delegate1(mySlice
 
vtkSmartPointer< vtkImageData > delegateConstGet0 (mySlice, get2DImageActor, vtkSmartPointer< vtkImageActor >) delegateConstGet0(mySlice
 
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > delegateConstGet0 (mySlice, getPickPlaneActor, vtkSmartPointer< vtkActor >) delegateGet0(mySlice
 
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > vtkSmartPointer< vtkActor > delegate3 (mySlice, pixelPicked, double, double, double) delegate0(mySlice
 
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > vtkSmartPointer< vtkActor > updatePickPlane delegate1 (mySlice, setSlice, int) delegate3(mySlice
 
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > vtkSmartPointer< vtkActor > updatePickPlane double delegateConstGet0 (mySlice, getNumberOfColors, int) delegate3(mySlice
 
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > vtkSmartPointer< vtkActor > updatePickPlane double double delegate1 (mySlice, setImageWorldTransform, vtkSmartPointer< vtkTransform >) int getNumberOfSlices() const override
 see Component.cpp More...
 
int getSlice () const override
 see Component.cpp More...
 
const QString & getFrameName () const override
 Hierarchy accessors / Modifyers. More...
 
 delegate1 (myFrame, setFrameName, QString) InterfaceFrame *getParentFrame() const override
 
void setParentFrame (InterfaceFrame *frame, bool keepTransform=true) override
 Set the parent frame and update or not its transform during the parent transition. More...
 
const QVector< InterfaceFrame * > & getChildrenFrame () const override
 Get the Children Frames from the current Frame in the Frame Hierarchy The Frame hierarchy may not be the same as the Component Hierarchy. More...
 
const vtkSmartPointer< vtkTransform > getTransformFromWorld () const override
 Transforms accessors / Modifyers. More...
 
const vtkSmartPointer< vtkTransform > getTransform () const override
 Get the transformation with respect to the parent frame. More...
 
const vtkSmartPointer< vtkTransform > getTransformFromFrame (InterfaceFrame *frame) const override
 Compute the transformation from any other frame to the current frame. More...
 
 delegate1 (myFrame, setTransform, vtkSmartPointer< vtkTransform >) delegate0(myFrame
 
resetTransform delegate3 (myFrame, translate, double, double, double) delegate3(myFrame
 
resetTransform double delegate3 (myFrame, rotateVTK, double, double, double) delegate3(myFrame
 
resetTransform double double delegate3 (myFrame, setTransformTranslationVTK, double, double, double) delegate3(myFrame
 
resetTransform double double double delegate3 (myFrame, setTransformRotationVTK, double, double, double) vtkSmartPointer< vtkAxesActor > getFrameAxisActor() override
 
 delegate2 (myFrame, setFrameVisibility, Viewer *, bool) bool getFrameVisibility(Viewer *viewer) const override
 
 delegate1 (myFrame, addFrameChild, InterfaceFrame *) delegate1(myFrame
 
- Public Member Functions inherited from camitk::InterfaceProperty
 ~InterfaceProperty ()=default
 empty virtual destructor, to avoid memory leak More...
 
- Public Member Functions inherited from camitk::InterfaceNode
virtual ~InterfaceNode ()=default
 empty virtual destructor, to avoid memory leak More...
 
- Public Member Functions inherited from camitk::InterfaceGeometry
virtual ~InterfaceGeometry ()=default
 empty virtual destructor, to avoid memory leak More...
 
virtual vtkSmartPointer< vtkPointSet > getPointSet ()=0
 
virtual void setPointSet (vtkSmartPointer< vtkPointSet >)=0
 set the low-level data set. More...
 
virtual void setPointData (vtkSmartPointer< vtkDataArray >)=0
 set the point data (may contains a lookup table). More...
 
virtual void setMeshWorldTransform (vtkSmartPointer< vtkTransform >)=0
 set the transformation for 3D representation More...
 
virtual vtkSmartPointer< vtkAlgorithmOutput > getDataPort () const =0
 get the custom algorithm pipeline input. More...
 
virtual void setDataConnection (vtkSmartPointer< vtkAlgorithmOutput >)=0
 Set/reset the connection for the InterfaceGeometry internal algorithm. More...
 
virtual vtkSmartPointer< vtkActor > getActor (const RenderingModes)=0
 Return the actor for the representation mode, NULL if the actor doesn't exist. More...
 
virtual void setTexture (vtkSmartPointer< vtkTexture >)=0
 Set a texture to this object. More...
 
virtual void setPointPosition (const unsigned int orderNumber, const double x, const double y, const double z)=0
 set a given point position More...
 
virtual void setRenderingModes (const RenderingModes)=0
 
virtual void setEnhancedModes (const EnhancedModes)=0
 set the enhanced mode More...
 
virtual const EnhancedModes getEnhancedModes () const =0
 get the current enhanced mode More...
 
virtual void setActorColor (const RenderingModes, double *color)=0
 Set the color of given representation modes. More...
 
virtual void setActorColor (const RenderingModes, const double, const double, const double)=0
 Set the color of given representation modes. More...
 
virtual void getActorColor (const RenderingModes, double *color)=0
 Get the color of given representation modes in the second parameter. More...
 
virtual void setColor (const double, const double, const double)=0
 Set an (r,g,b) color to all representation modes, without changing the opacity. More...
 
virtual void setColor (const double, const double, const double, const double)=0
 Set an (r,g,b,a) color to all representation modes. More...
 
virtual void setActorOpacity (const RenderingModes, const double)=0
 Set the opacity of this representation modes. WARNING color field (surfaceColor, ...) are not modified! More...
 
virtual double getActorOpacity (const RenderingModes) const =0
 Return the opacity of a given renderng mode. More...
 
virtual void setOpacity (const double)=0
 Set the opacity of this object. WARNING color field (surfaceColor, ...) are not modified! More...
 
virtual void setMapperScalarRange (double min, double max)=0
 Set the mapper scalar range. More...
 
virtual void setGlyphType (const GlyphTypes type, const double size=0.0)=0
 Set the glyph type (a glyph is a geometric representation attached to every point in the input dataset). More...
 
virtual void setLinesAsTubes (bool)=0
 set the lines as tubes (works only for vtkDataSet representation that contains lines) More...
 
- Public Member Functions inherited from camitk::InterfaceBitMap
virtual vtkSmartPointer< vtkImageActor > get2DImageActor () const =0
 Return the vtkImageActor (vtkProp) representing a slice to be displayed in 2D viewers. More...
 
virtual vtkSmartPointer< vtkImageActor > get3DImageActor () const =0
 Return the vtkImageActor (vtkProp) representing a slice to be displayed in 3D viewers. More...
 
virtual vtkSmartPointer< vtkActor > getPickPlaneActor () const =0
 Return the vtkActor used to pick pixels in the slices. More...
 
virtual vtkSmartPointer< vtkActor > getPixelActor ()=0
 Return the vtkActor used to pick pixels in the slices. More...
 
virtual void pixelPicked (double, double, double)=0
 Return 2D Axes at the proper slice origin. More...
 
virtual void setImageWorldTransform (vtkSmartPointer< vtkTransform >)=0
 set the transformation for 3D image representation More...
 
virtual void setOriginalVolume (vtkSmartPointer< vtkImageData >)=0
 set the original volume image data (the source vtkImageData before any reslice) and refresh the vtk pipeline More...
 
virtual void setPixelRealPosition (double, double, double)=0
 move the pixel selection green indicator (pixelActor) to the given real position More...
 
virtual void setSlice (int s)=0
 Set the current slice index. More...
 
virtual void setSlice (double x, double y, double z)=0
 Set the slice corresponding to the given image coordinates (in RAI convention) More...
 
virtual void updatePickPlane ()=0
 
virtual ~InterfaceBitMap ()=default
 virtual destructor More...
 
- Public Member Functions inherited from camitk::InterfaceFrame
virtual void addFrameChild (InterfaceFrame *frame)=0
 Add the input frame as a child of the current frame. More...
 
virtual vtkSmartPointer< vtkAxesActor > getFrameAxisActor ()=0
 Gives the 3D representation of the frame (based on xyz arrows) More...
 
virtual bool getFrameVisibility (Viewer *viewer) const =0
 Get the Component Frame visibility for a given viewer. More...
 
virtual void removeFrameChild (InterfaceFrame *frame)=0
 Remove the input frame as a child of the current frame. More...
 
virtual void setFrameVisibility (Viewer *viewer, bool visible)=0
 Set the Component Frame visible for a given viewer. More...
 
virtual ~InterfaceFrame ()=default
 empty virtual destructor, to avoid memory leak More...
 
virtual void setFrameName (QString name)=0
 Set the Frame Unique identifyer. More...
 
virtual InterfaceFramegetParentFrame () const =0
 Get the parent frame. More...
 
virtual void setTransform (vtkSmartPointer< vtkTransform > transform)=0
 Set the current input frame position (according to its parent Frame) More...
 
virtual void resetTransform ()=0
 Set the current frame transform to identity. More...
 
virtual void translate (double x, double y, double z)=0
 Apply a translation relative to the current position. More...
 
virtual void rotate (double aroundX, double aroundY, double aroundZ)=0
 Apply rotations relative to the current position in the alphabetical order (X, Y, Z). More...
 
virtual void rotateVTK (double aroundX, double aroundY, double aroundZ)=0
 Apply a rotation relative to the current position, using the VTK rotation order (Z, X, Y) More...
 
virtual void setTransformTranslation (double x, double y, double z)=0
 Set the translation part of the 3D space transformation of the current frame. More...
 
virtual void setTransformTranslationVTK (double x, double y, double z)=0
 Set the translation part of the 3D space transformation of the current frame. More...
 
virtual void setTransformRotation (double aroundX, double aroundY, double aroundZ)=0
 Set the rotation part of the 3D space transformation of the current frame. More...
 
virtual void setTransformRotationVTK (double aroundX, double aroundY, double aroundZ)=0
 Set the rotation part of the 3D space transformation of the current frame. More...
 

Private Member Functions

camitk::ImageOrientationHelper::PossibleImageOrientations readDirectCosinesAngle (const std::vector< std::string > &fileNames) const
 Read the direct cosines angles from the input image. More...
 
double roundCosine (const double &value) const
 Round the cosine input to the closest value between -1, 0 or 1. More...
 
void updateLUT ()
 Update the LUT of the image by reading the good information from the DICOM headers. More...
 

Private Attributes

vtkSmartPointer< vtkGDCMImageReader > imageReader
 The image reader using GDCM that allows to read DICOM image as vtkImageData. More...
 
DicomSerieserie
 The associated DicomSerie to this component. More...
 

Additional Inherited Members

- Public Types inherited from camitk::Component
enum  Representation { GEOMETRY, SLICE, NO_REPRESENTATION }
 The different representation that can be implemented to represent this Component in the InteractiveViewer. More...
 
- Public Types inherited from camitk::InterfaceGeometry
enum  EnhancedMode { Normal = 0x0, Hidden = 0x1, Shaded = 0x2, Highlighted = 0x4 }
 (and QFlags EnhancedModes) handle the way the rendering actors will be enhanced or not (from completely hidden to highlighted) More...
 
enum  GlyphType { NoGlyph = 0x0, Sphere = 0x1 }
 (and QFlags GlyphTypes) is the type of glyph attached to the geometry representation More...
 
enum  RenderingMode { None = 0x0, Surface = 0x1, Wireframe = 0x2, Points = 0x4 }
 (and QFlags RenderingModes) handle actor rendering options (render this InterfaceGeometry as a surface, a wireframe and set of points). More...
 
- Public Attributes inherited from camitk::Component
 setPointSet
 
vtkSmartPointer< vtkPointSet > getDataPort
 
vtkSmartPointer< vtkPointSet > vtkSmartPointer< vtkAlgorithmOutput > getActor
 
vtkSmartPointer< vtkPointSet > vtkSmartPointer< vtkAlgorithmOutput > vtkSmartPointer< vtkActor >
 
 setRenderingModes
 
 getEnhancedModes
 
const EnhancedModes setActorColor
 
const EnhancedModes const RenderingModes
 
const EnhancedModes const const double
 
const EnhancedModes const const const double
 
 setColor
 
const double
 
const const double
 
const const const double
 
const const const const double getActorOpacity
 
const const const const double double
 
const const const const double const RenderingModes setMapperScalarRange
 
const const const const double const RenderingModes double
 
const const const const double const RenderingModes double const double size = 0.0) override
 
 setMeshWorldTransform
 
 setOriginalVolume
 
vtkSmartPointer< vtkImageData > get3DImageActor
 
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > getPixelActor
 
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > vtkSmartPointer< vtkActor > updatePickPlane setSlice
 
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > vtkSmartPointer< vtkActor > updatePickPlane double
 
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > vtkSmartPointer< vtkActor > updatePickPlane double setPixelRealPosition
 
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > vtkSmartPointer< vtkActor > updatePickPlane double double
 
resetTransform rotate
 
resetTransform double
 
resetTransform double setTransformTranslation
 
resetTransform double double
 
resetTransform double double setTransformRotation
 
resetTransform double double double
 
 removeFrameChild
 
- Public Attributes inherited from camitk::InterfaceBitMap
QMap< QString, vtkSmartPointer< vtkProp > > extraProp
 The additional map for prop (include at least "label" and "glyph". More...
 
- Protected Member Functions inherited from camitk::ImageComponent
virtual void setImageData (vtkSmartPointer< vtkImageData > anImageData, bool copy, ImageOrientationHelper::PossibleImageOrientations initialOrientation=ImageOrientationHelper::RAI, vtkSmartPointer< vtkMatrix4x4 > initialTransformMatrix=nullptr)
 Set the image data of the volumic images with the given orientation options. More...
 
virtual void setSingleImageComponents (SingleImageComponent *axialSlices, SingleImageComponent *sagittalSlices, SingleImageComponent *coronalSlices, SingleImageComponent *arbitrarySlices)
 Set all single images. More...
 
- Protected Attributes inherited from camitk::Component
ComponentList childrenComponent
 The explorer sub items. More...
 
unsigned int indexOfPropertyExplorerTab
 The PropertyExplorer tab index to select once refreshed. More...
 
bool isSelectedFlag
 tells if this particular Component is selected or not More...
 
bool modifiedFlag
 the modificatio flag (could be extended to manage a undo/redo list) More...
 
QString myFileName
 the file name from which the Component is loaded More...
 
InterfaceFramemyFrame
 myFrame is the pose (position and orientation) of the Component in the world frame, the Component delegates all InterfaceFrame activity to myFrame (delegation pattern) More...
 
InterfaceGeometrymyGeometry
 myGeometry is the 3d representation of this Component, the Component delegates all InterfaceGeometry activity to myGeometry (delegation pattern) More...
 
InterfaceNodemyParentNode
 who is the boss? The Component! More...
 
InterfaceBitMapmySlice
 mySlice is the slice representation of this data component, the Component delegates all InterfaceBitMap activity to mySlice (delegation pattern) More...
 

Detailed Description

DICOM Component represents a volumic image of a DICOM SERIES with its corresponding tags information (as CamiTK properties).

This class is part of the MODEL (in the MVP pattern) of the DICOM COMPONENT.

Note
This component uses GDCM >= 2.2 library.

Constructor & Destructor Documentation

◆ DicomComponent()

DicomComponent::DicomComponent ( DicomSerie dSerie)

Create a new Component that handles DICOM images This method may throw an AbortException if a problem occurs.

Parameters
dSerieto the associated DicomSerie

TODO Store Image position patient as a CamiTK property?

TODO Retrieve image position patient information

References CAMITK_ERROR, CAMITK_WARNING, camitk::ImageComponent::getLut(), DicomSerie::getStdFileNames(), DicomParser::getZSpacing(), imageReader, readDirectCosinesAngle(), serie, camitk::ImageComponent::setImageData(), camitk::Component::setName(), and updateLUT().

◆ ~DicomComponent()

DicomComponent::~DicomComponent ( )
virtual

Default Destructor.

References serie.

Referenced by getSerie().

Member Function Documentation

◆ getSerie()

DicomSerie* DicomComponent::getSerie ( )
inline

Get the DicomSerie associated to this component.

References serie, and ~DicomComponent().

◆ readDirectCosinesAngle()

camitk::ImageOrientationHelper::PossibleImageOrientations DicomComponent::readDirectCosinesAngle ( const std::vector< std::string > &  fileNames) const
private

Read the direct cosines angles from the input image.

Parameters
fileNamesthe SERIE slices
Returns
the corresponding ImageOrientation, rounded modulo 90 degrees

References CAMITK_ERROR_IF, CAMITK_WARNING, and roundCosine().

Referenced by DicomComponent().

◆ roundCosine()

double DicomComponent::roundCosine ( const double value) const
private

Round the cosine input to the closest value between -1, 0 or 1.

Parameters
valuethe input cosine value
Returns
the rounded cosine value -1, 0 or 1

Referenced by readDirectCosinesAngle().

◆ updateLUT()

void DicomComponent::updateLUT ( )
private

Update the LUT of the image by reading the good information from the DICOM headers.

Note
This method would have to be removed as soons as the CamiTK LUT is updated and working.

References camitk::ImageComponent::getLut(), and imageReader.

Referenced by DicomComponent().

Member Data Documentation

◆ imageReader

vtkSmartPointer<vtkGDCMImageReader> DicomComponent::imageReader
private

The image reader using GDCM that allows to read DICOM image as vtkImageData.

Note
This class allows to make the bridge between GDCM and CamiTK.

Referenced by DicomComponent(), and updateLUT().

◆ serie

DicomSerie* DicomComponent::serie
private

The associated DicomSerie to this component.

Referenced by DicomComponent(), getSerie(), and ~DicomComponent().


The documentation for this class was generated from the following files: